BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B05SP1|AL424908
(1016 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig823 1923 0.0
>3x_Contig823
Length = 3303
Score = 1923 bits (969), Expect = 0.0
Identities = 991/997 (99%), Gaps = 2/997 (0%)
Strand = Plus / Plus
Query: 1 gatcaatcaattctagaggcctaagtccaaaaaactcattgagcgtaagatttcatttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2039 gatcaatcaattctagaggcctaagtccaaaaaactcattgagcgtaagatttcatttct 2098
Query: 61 gttttctttgttatacctattttatcatttcgtttccttttcttaaaattcatctttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2099 gttttctttgttatacctattttatcatttcgtttccttttcttaaaattcatctttgtt 2158
Query: 121 ttttttggtttttggaaacatactattttcttggaaataacccatctcgatcgatatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2159 ttttttggtttttggaaacatactattttcttggaaataacccatctcgatcgatatctt 2218
Query: 181 ttaaaggaattttttttttgataaaaaaaaattaattacttcctaaagaacaaaagggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2219 ttaaaggaattttttttttgataaaaaaaaattaattacttcctaaagaacaaaagggtt 2278
Query: 241 acataaaactttcaagaaacaaaagagaagagggaaaagaaggaaaaaagtctcattctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2279 acataaaactttcaagaaacaaaagagaagagggaaaagaaggaaaaaagtctcattctt 2338
Query: 301 cttgtgaatcataggagtacagtcctgtttcagaacattatcaattgtattttgtaacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2339 cttgtgaatcataggagtacagtcctgtttcagaacattatcaattgtattttgtaacag 2398
Query: 361 tgagataggagttgcgtacttcactcgttcacgtacctggagaatagcagtttattcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2399 tgagataggagttgcgtacttcactcgttcacgtacctggagaatagcagtttattcttc 2458
Query: 421 tattttctgcttcccatccttttgtgattggttaavaaaacagtgaactcatccaccaat 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2459 tattttctgcttcccatccttttgtgattggttaaaaaaacagtgaactcatccaccaat 2518
Query: 481 attctaaccttagagaagaactccagtcgatagagagacaccacacagttcaacaattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2519 attctaaccttagagaagaactccagtcgatagagagacaccacacagttcaacaattat 2578
Query: 541 tcagcattttgtcgaaagcaaaacattgttttctttggtgattattctgttctgctattt 600
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2579 tcagcattttgtcgaaagcaaaacattgttttctttggtgattatcctgttctgctattt 2638
Query: 601 aattgagtttcttgagcgtttgacaaaaagtgaatcttcgctcttcatctcatttatcgt 660
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2639 aattcagtttcttgagcgtttgacaaaaagtgaatcttcgctcttcatctcatttatcgt 2698
Query: 661 ctttttttggcattagtgttactttagtgcacatttccacacattgatcattcttacgac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2699 ctttttttggcattagtgttactttagtgcacatttccacacattgatcattcttacgac 2758
Query: 721 gaggccatcattcatatgccaataagcaatatcaactcaaatccaaactccaataacatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2759 gaggccatcattcatatgccaataagcaatatcaactcaaatccaaactccaataacatc 2818
Query: 781 aacgaaaaccccatgatgatccatccttccttcgatacaacttatcagctgcatcgtgga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2819 aacgaaaaccccatgatgatccatccttccttcgatacaacttatcagctgcatcgtgga 2878
Query: 841 ttcagtactagctctgaacagttatcagcagttaatcccagcaacgcatcgccaacacat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2879 ttcagtactagctctgaacagttatcagcagttaatcccagcaacgcatcgccaacacat 2938
Query: 901 gcaaatggttcgacaatacctcgccaccactcggaccacagtggttca-cactaaacctc 959
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2939 gcaaatggttcgacaatacctcgccaccactcggaccacagtggttcaccactaaacctc 2998
Query: 960 tcatcggtactgaacacattat-cawtaacactggaa 995
|||||||||||||||||||||| || |||||||||||
Sbjct: 2999 tcatcggtactgaacacattatccattaacactggaa 3035
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,964
Number of Sequences: 1807
Number of extensions: 11964
Number of successful extensions: 142
Number of sequences better than 1.0e-20: 1
length of query: 1016
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1000
effective length of database: 10,329,639
effective search space: 10329639000
effective search space used: 10329639000
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)